scaleBranches - Scale branch lengths to represent either mutations or mutations per site.

Description¶

scaleBranches Branch length scaling function.

Usage¶

scaleBranches(clones, edge_type = "mutations")

Arguments¶

clones

a tibble of airrClone and phylo objects, the output of getTrees.

edge_type

Either genetic_distance (mutations per site) or mutations

Value¶

A tibble with phylo objects that have had branch lengths rescaled as specified.

Details¶

Uses clones$trees[[1]]$edge_type to determine how branches are currently scaled.

See also¶

getTrees